 In this section you can establish or edit the coordinates according to    1 I01 000
 which the circular plasmid map will be drawn. Although limited notes      1 I01 000
 are added among the data tables below, reference to the program manual    1 I01 000
 is recommended.                                                           1 I01 000
                                                                           1 I01 000
 For information concerning how to move around, press <F1>.                1 I01 000
                                                                           1 I01 000
 To exit, press <ESC>.                                                     1 I01 000
                                                                           1 I01 000
                                                                           1 I01 000
                                                                           1 I01 000
                                                                           1 I01 000
                                                                           1 I01 000
                                                                           1 I01 000
 FILENAME                                                                  2 I01 000
 Ŀ                                                            3 I01 000
                                                                         9 E01 000
                                                             3 I02 000
                                                                           1 I02 000
                                                                           1 I02 000
 PLASMID NAME                                                              2 I02 000
 Ŀ                                                    3 I02 000
                                                                         9 E02 000
                                                     3 I03 000
                                                                           1 I03 000
                                                                           1 I03 000
 SIZE                          FORM                                        2 I03 000
 Ŀ                      Ŀ                                  3 I03 000
                             circular                                  9 E03 000
                                                         3 I04 000
                               Change with C or L                          1 I04 000
                                                                           1 I04 000
                                                                           1 I04 000
 LINE TYPES OF THE PLASMID CIRCLE                                          2 I04 000
  no thickness lines  pen                                                  2 I04 000
 Ŀ                                                 3 I04 000
  1  0.000     1   1  single                                          9 E04 000
  2  0.020     3   1  heavy                                           9 E04 000
  3  0.030     2   1  double                                          9 E04 000
  4  0.100     2   1  broad double                                    9 E04 000
  5  0.000     0   0  user defined                                    9 E04 000
\ 6  0.000     0   0  user defined                                    9 E04 005
                                                  3 I05 000
 In the table below, reference is made to these line types.                1 I05 000
                                                                           1 I05 000
                                                                           1 I05 000
 COMPOSITION OF THE PLASMID CIRCLE                                         2 I05 000
    from     to  type                                                      2 I05 000
 Ŀ                                                      3 I05 000
      0   1000  1                                                      9 E05 000
                                                                       9 E05 000
\                                                                      9 E05 002
                                                       3 I06 000
 To add arrows to the line borders, press > or < for the forward and       1 I06 000
 the backward arrow. At contradiction, the arrow at the thicker line       1 I06 000
 dominates. CTRL-A removes an arrowhead.                                   1 I06 000
 Overlapping definitions are allowed here and the latest definition        1 I06 000
 overrides the others. To compose the overlaps, exit the cursor from       1 I06 000
 the table.                                                                1 I06 000
                                                                           1 I06 000
                                                                           1 I06 000
                                                                           1 I06 000
 GENES                                                                     2 I06 000
   from     to    D            name                                        2 I06 000
 Ŀ                        3 I06 000
                                                                      9 E06 000
\                                                                     9 E06 001
                         3 I07 000
 Enter the genes in a clockwise direction irrespective of                  1 007 000
 their actual direction.                                                   1 007 000
 To add arrowheads to the ends of the genes, press > or <                  1 I07 000
 while staying in the coordinate box. CTRL-A removes an                    1 I07 000
 arrowhead.                                                                1 I07 000
 The D-box shows the direction of the gene name                            1 I07 000
 on the map. It is calculated as you exit the line if the                  1 I07 000
 D-box is empty. You can edit also the D-box.                              1 I07 000
                                                                           1 I07 000
                                                                           1 I07 000
 SITES                                                                     2 I07 000
 coordinate       name           type                                      2 I07 000
   Ŀ                                    3 I07 000
                                                                       9 E07 000
\                                                                      9 E07 001
                                       3 I08 000
   If the name box is left empty, the previous name is                     1 I08 000
   copied in the box.                                                      1 I08 000
   CTRL-T changes the site type (enzyme, by default).                      1 I08 000
                                                                           1 I08 000
                                                                           1 I08 000
 SUPPRESSION LIST                                                          2 I08 000
    status    component                                                    2 I08 000
 Ŀ                                                              3 I08 000
   active   Draw a box around the map                                    9 E08 000
   active   Write the plasmid name                                       9 E08 000
   active   Write the plasmid size                                       9 E08 000
   active   Write the site coordinates                                   9 E08 000
   active   Write the site names                                         9 E08 000
   active   Draw the site marks                                          9 E08 000
   active   Write the gene names                                         9 E08 000
   active   Draw the gene arcs                                           9 E08 000
 suppressed Draw a box around the comments                               9 E08 000
   active   Write the comments                                           9 E08 000
                                                               3 I09 000
 Change status by CTRL-S                                                   1 I09 000
                                                                           1 I09 000
                                                                           1 I09 000
 PICTURE COMPONENTS                                                        2 I09 000
 current  default                                                          2 I09 000
  value    value   component                                               2 I09 000
 Ŀ                                                         3 I09 000
         0.090  sites: character size  (y-comp)                         9 E09 000
         1.00          character shape (x/y ratio)                      9 E09 000
         0.070  genes: character size  (y-comp)                         9 E09 000
         1.00          character shape (x/y ratio)                      9 E09 000
         0.150  name:  character size  (y-comp)                         9 E09 000
         0.67          character shape (x/y ratio)                      9 E09 000
         0.20   length of the site mark                                 9 E09 000
            1   number of blanks after the longest enzyme name          9 E09 000
         0.80   distance of the gene arcs from center                   9 E09 000
           50   angle of the gene arrows                                9 E09 000
           80   angle of the block arrows on the plasmid                9 E09 000
         1.00   magnification  (max      )                              9 E09 000
                                                          3 I10 000
 Press CTRL-D to retain the default value.                                 1 I10 000
                                                                           1 I10 000
                                                                           1 I10 000
 COMMENTS                                                                  2 I10 000
 Ŀ3 I10 000
                                                                         9 E10 000
                                                                         9 E10 000
                                                                         9 E10 000
                                                                         9 E10 000
                                                                         9 E10 000
                                                  University of Helsinki 9 E10 000
                                                  Department of Genetics 9 E10 000
                                                  Arkadiankatu 7         9 E10 000
                                                  SF-OO1OO Helsinki      9 E10 000
                                                  FINLAND                9 E10 000
                                                                         9 E10 010
 3 I11 000
                                                                           1 I11 000
                                                                           1 I11 000
                                                                           1 I11 000
                                                                           1 I11 000
                                                                           1 I11 000
                                                                           1 I11 000
                                                                           1 I11 000
                                                                           1 I11 000
                                                                           1 I11 000
                                                                           1 I11 000
----END
THE USED PART OF THIS FILE ENDED TWO LINES AGO.
THE FILE IS AN IMAGE OF THE DISPLAY FOR EDITING MAP COORDINATES
FOR THE DRAWMAP PROGRAM.

THE STRUCTURE OF THIS FILE IS:

CHARACTER
        1   \ MEANS THAT THE LINE IS NOT SHOWN ON SCREEN
     1-75   CONTAINS THE TEXT FOR THE SCREEN
       76   GIVES THE COLOR OF THE LINE
       77   EMPTY
    78-80   TELLS WHAT PART OF THE DISPLAY THE LINE BELONGS TO
              -E MEANS ACTUAL DATA LINE
              -I MEANS COMMENT LINE
       81   EMPTY
    82-84   NONZERO AFTER A LINE WHICH CAN BE REPEATED ACCORDING TO
            A PROGRAM PARAMETER. TELLS THE PROGRAM HOW MANY LINES
            HAVE ALREADY BEEN USED IN THE BLOCK.
